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09.19.2008 at 02:12AM PDT, ID: 23745299
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5.2

rsync/scp fails with ENOTTY problem in a job script to transfer data

Asked by rongten in Bourne-Again Shell (bash), Unix Networking, Open Source Programming

Tags: , , ,

Hello, I'm upgrading some linux workstations runnnig fc6 and torque 2.3.1 to fc9 and torque 2.3.3. In order not to overload NFS, when a script starts, it connects to the fileserver via rsync, copies the directory of interest in a scratch space there, and then runs. At the end, with rsync, the results are copied back. All works well with fc6, but in the new machines that I have upgraded rysnc and scp refuse to work. Strace seems suggesting that they crash because they are not run in an interactive shell.

Problem is, on fc6 where working correctly.. So I tried all and I cannot find a solution. Any help? Here are more infos:

relevant part of the pbs script:
######################
export CASEDIR=/ea_users/test/memory_test
export SERVER=diskserver1
copy_data_in_tmp
######################

the copy_data_in_tmp is a bash function that is sourced at login time in /etc/profile.d/
a version with scp instead of rsync is the following:

#####################
copy_data_in_tmp()
{
  ...bla bla bla...
   EXECU=$(whoami)
   echo "$EXECU launches the scp -B -r ${AVA}${ORIG} $DEST"
   strace scp -B -r ${AVA}${ORIG} $DEST
}
#####################
the log file of pbs gives the attempted command:

scp -r diskserver1:/ea_users/test/memory_test/ /work/test/91/

and the strace is:
###################################
execve("/usr/bin/scp", ["scp", "-B", "-r", "test@diskserver1:"..., "/work/test/91/"...], [/* 62 vars */]) = 0
brk(0)                                  = 0xb834a000
mmap2(NULL, 4096, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) = 0xb7f11000
access("/etc/ld.so.preload", R_OK)      = -1 ENOENT (No such file or directory)
open("/personnel/ea/test/local/lib/tls/i686/sse2/libresolv.so.2", O_RDONLY) = -1 ENOENT (No such file or directory)
stat64("/personnel/ea/test/local/lib/tls/i686/sse2", 0xbfa1e8b0) = -1 ENOENT (No such file or directory)
open("/personnel/ea/test/local/lib/tls/i686/libresolv.so.2", O_RDONLY) = -1 ENOENT (No such file or directory)
stat64("/personnel/ea/test/local/lib/tls/i686", 0xbfa1e8b0) = -1 ENOENT (No such file or directory)
open("/personnel/ea/test/local/lib/tls/sse2/libresolv.so.2", O_RDONLY) = -1 ENOENT (No such file or directory)
stat64("/personnel/ea/test/local/lib/tls/sse2", 0xbfa1e8b0) = -1 ENOENT (No such file or directory)
open("/personnel/ea/test/local/lib/tls/libresolv.so.2", O_RDONLY) = -1 ENOENT (No such file or directory)
stat64("/personnel/ea/test/local/lib/tls", 0xbfa1e8b0) = -1 ENOENT (No such file or directory)
open("/personnel/ea/test/local/lib/i686/sse2/libresolv.so.2", O_RDONLY) = -1 ENOENT (No such file or directory)
stat64("/personnel/ea/test/local/lib/i686/sse2", 0xbfa1e8b0) = -1 ENOENT (No such file or directory)
open("/personnel/ea/test/local/lib/i686/libresolv.so.2", O_RDONLY) = -1 ENOENT (No such file or directory)
stat64("/personnel/ea/test/local/lib/i686", 0xbfa1e8b0) = -1 ENOENT (No such file or directory)
open("/personnel/ea/test/local/lib/sse2/libresolv.so.2", O_RDONLY) = -1 ENOENT (No such file or directory)
stat64("/personnel/ea/test/local/lib/sse2", 0xbfa1e8b0) = -1 ENOENT (No such file or directory)
open("/personnel/ea/test/local/lib/libresolv.so.2", O_RDONLY) = -1 ENOENT (No such file or directory)
stat64("/personnel/ea/test/local/lib", 0xbfa1e8b0) = -1 ENOENT (No such file or directory)
open("/etc/ld.so.cache", O_RDONLY)      = 3
fstat64(3, {st_mode=S_IFREG|0644, st_size=98896, ...}) = 0
mmap2(NULL, 98896, PROT_READ, MAP_PRIVATE, 3, 0) = 0xb7ef8000
close(3)                                = 0
open("/lib/libresolv.so.2", O_RDONLY)   = 3
read(3, "\177ELF\1\1\1\0\0\0\0\0\0\0\0\0\3\0\3\0\1\0\0\0@\361\203\0004\0\0\0"..., 512) = 512
fstat64(3, {st_mode=S_IFREG|0755, st_size=84804, ...}) = 0
mmap2(NULL, 84164, PROT_READ|PROT_EXEC, MAP_PRIVATE|MAP_DENYWRITE, 3, 0) = 0x12f000
mmap2(0x140000, 8192, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 3, 0x10) = 0x140000
mmap2(0x142000, 6340, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_ANONYMOUS, -1, 0) = 0x142000
close(3)                                = 0
open("/lib/libcrypto.so.7", O_RDONLY)   = 3
read(3, "\177ELF\1\1\1\0\0\0\0\0\0\0\0\0\3\0\3\0\1\0\0\0@\331\301\0074\0\0\0"..., 512) = 512
fstat64(3, {st_mode=S_IFREG|0755, st_size=1351056, ...}) = 0
mmap2(NULL, 1366072, PROT_READ|PROT_EXEC, MAP_PRIVATE|MAP_DENYWRITE, 3, 0) = 0x144000
mmap2(0x27b000, 81920, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 3, 0x136) = 0x27b000
mmap2(0x28f000, 10296, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_ANONYMOUS, -1, 0) = 0x28f000
close(3)                                = 0
open("/lib/libutil.so.1", O_RDONLY)     = 3
read(3, "\177ELF\1\1\1\0\0\0\0\0\0\0\0\0\3\0\3\0\1\0\0\0 z\203\0004\0\0\0"..., 512) = 512
fstat64(3, {st_mode=S_IFREG|0755, st_size=15060, ...}) = 0
mmap2(NULL, 12420, PROT_READ|PROT_EXEC, MAP_PRIVATE|MAP_DENYWRITE, 3, 0) = 0x292000
mmap2(0x294000, 8192, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 3, 0x1) = 0x294000
close(3)                                = 0
open("/lib/libz.so.1", O_RDONLY)        = 3
read(3, "\177ELF\1\1\1\0\0\0\0\0\0\0\0\0\3\0\3\0\1\0\0\0 6\251\0004\0\0\0"..., 512) = 512
fstat64(3, {st_mode=S_IFREG|0755, st_size=79376, ...}) = 0
mmap2(NULL, 80624, PROT_READ|PROT_EXEC, MAP_PRIVATE|MAP_DENYWRITE, 3, 0) = 0x296000
mmap2(0x2a9000, 4096, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 3, 0x12) = 0x2a9000
close(3)                                = 0
open("/lib/libnsl.so.1", O_RDONLY)      = 3
read(3, "\177ELF\1\1\1\0\0\0\0\0\0\0\0\0\3\0\3\0\1\0\0\0000\341\201\0004\0\0\0"..., 512) = 512
fstat64(3, {st_mode=S_IFREG|0755, st_size=113600, ...}) = 0
mmap2(NULL, 104392, PROT_READ|PROT_EXEC, MAP_PRIVATE|MAP_DENYWRITE, 3, 0) = 0x2aa000
mmap2(0x2c0000, 8192, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 3, 0x15) = 0x2c0000
mmap2(0x2c2000, 6088, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_ANONYMOUS, -1, 0) = 0x2c2000
close(3)                                = 0
open("/lib/libcrypt.so.1", O_RDONLY)    = 3
read(3, "\177ELF\1\1\1\0\0\0\0\0\0\0\0\0\3\0\3\0\1\0\0\0000\27\371\0074\0\0\0"..., 512) = 512
fstat64(3, {st_mode=S_IFREG|0755, st_size=49368, ...}) = 0
mmap2(NULL, 201020, PROT_READ|PROT_EXEC, MAP_PRIVATE|MAP_DENYWRITE, 3, 0) = 0x2c4000
mmap2(0x2cd000, 8192, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 3, 0x9) = 0x2cd000
mmap2(0x2cf000, 155964, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_ANONYMOUS, -1, 0) = 0x2cf000
close(3)                                = 0
open("/lib/libnss3.so", O_RDONLY)       = 3
read(3, "\177ELF\1\1\1\0\0\0\0\0\0\0\0\0\3\0\3\0\1\0\0\0\360U4\0024\0\0\0"..., 512) = 512
mmap2(NULL, 4096, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) = 0xb7ef7000
fstat64(3, {st_mode=S_IFREG|0755, st_size=1273236, ...}) = 0
mmap2(NULL, 1273048, PROT_READ|PROT_EXEC, MAP_PRIVATE|MAP_DENYWRITE, 3, 0) = 0x2f6000
mmap2(0x428000, 20480, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 3, 0x132) = 0x428000
close(3)                                = 0
open("/usr/lib/libgssapi_krb5.so.2", O_RDONLY) = 3
read(3, "\177ELF\1\1\1\0\0\0\0\0\0\0\0\0\3\0\3\0\1\0\0\0`\10\324\0074\0\0\0"..., 512) = 512
fstat64(3, {st_mode=S_IFREG|0755, st_size=192124, ...}) = 0
mmap2(NULL, 188892, PROT_READ|PROT_EXEC, MAP_PRIVATE|MAP_DENYWRITE, 3, 0) = 0x42d000
mmap2(0x45a000, 8192, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 3, 0x2d) = 0x45a000
close(3)                                = 0
open("/usr/lib/libkrb5.so.3", O_RDONLY) = 3
read(3, "\177ELF\1\1\1\0\0\0\0\0\0\0\0\0\3\0\3\0\1\0\0\0pE\332\0074\0\0\0"..., 512) = 512
fstat64(3, {st_mode=S_IFREG|0755, st_size=652632, ...}) = 0
mmap2(NULL, 653608, PROT_READ|PROT_EXEC, MAP_PRIVATE|MAP_DENYWRITE, 3, 0) = 0x45c000
mmap2(0x4f9000, 12288, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 3, 0x9c) = 0x4f9000
close(3)                                = 0
open("/usr/lib/libk5crypto.so.3", O_RDONLY) = 3
read(3, "\177ELF\1\1\1\0\0\0\0\0\0\0\0\0\3\0\3\0\1\0\0\0 \350\326\0074\0\0\0"..., 512) = 512
fstat64(3, {st_mode=S_IFREG|0755, st_size=153308, ...}) = 0
mmap2(NULL, 150944, PROT_READ|PROT_EXEC, MAP_PRIVATE|MAP_DENYWRITE, 3, 0) = 0x4fc000
mmap2(0x520000, 4096, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 3, 0x24) = 0x520000
close(3)                                = 0
open("/lib/libcom_err.so.2", O_RDONLY)  = 3
read(3, "\177ELF\1\1\1\0\0\0\0\0\0\0\0\0\3\0\3\0\1\0\0\0\360\232\207\0004\0\0\0"..., 512) = 512
fstat64(3, {st_mode=S_IFREG|0755, st_size=9708, ...}) = 0
mmap2(NULL, 10856, PROT_READ|PROT_EXEC, MAP_PRIVATE|MAP_DENYWRITE, 3, 0) = 0x521000
mmap2(0x523000, 4096, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 3, 0x1) = 0x523000
close(3)                                = 0
open("/lib/libc.so.6", O_RDONLY)        = 3
read(3, "\177ELF\1\1\1\0\0\0\0\0\0\0\0\0\3\0\3\0\1\0\0\0@\7\217\0004\0\0\0"..., 512) = 512
fstat64(3, {st_mode=S_IFREG|0755, st_size=1758448, ...}) = 0
mmap2(NULL, 1476176, PROT_READ|PROT_EXEC, MAP_PRIVATE|MAP_DENYWRITE, 3, 0) = 0x524000
mmap2(0x687000, 12288, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 3, 0x163) = 0x687000
mmap2(0x68a000, 9808, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_ANONYMOUS, -1, 0) = 0x68a000
close(3)                                = 0
open("/lib/libdl.so.2", O_RDONLY)       = 3
read(3, "\177ELF\1\1\1\0\0\0\0\0\0\0\0\0\3\0\3\0\1\0\0\0`\n\247\0004\0\0\0"..., 512) = 512
fstat64(3, {st_mode=S_IFREG|0755, st_size=20460, ...}) = 0
mmap2(NULL, 4096, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) = 0xb7ef6000
mmap2(NULL, 16500, PROT_READ|PROT_EXEC, MAP_PRIVATE|MAP_DENYWRITE, 3, 0) = 0x68d000
mmap2(0x690000, 8192, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 3, 0x2) = 0x690000
close(3)                                = 0
open("/lib/libnssutil3.so", O_RDONLY)   = 3
read(3, "\177ELF\1\1\1\0\0\0\0\0\0\0\0\0\3\0\3\0\1\0\0\0p\310\4\0024\0\0\0"..., 512) = 512
fstat64(3, {st_mode=S_IFREG|0755, st_size=99552, ...}) = 0
mmap2(NULL, 100684, PROT_READ|PROT_EXEC, MAP_PRIVATE|MAP_DENYWRITE, 3, 0) = 0x692000
mmap2(0x6a8000, 12288, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 3, 0x15) = 0x6a8000
close(3)                                = 0
open("/lib/libplc4.so", O_RDONLY)       = 3
read(3, "\177ELF\1\1\1\0\0\0\0\0\0\0\0\0\3\0\3\0\1\0\0\0P\36\4\0024\0\0\0"..., 512) = 512
fstat64(3, {st_mode=S_IFREG|0755, st_size=16100, ...}) = 0
mmap2(NULL, 17256, PROT_READ|PROT_EXEC, MAP_PRIVATE|MAP_DENYWRITE, 3, 0) = 0x6ab000
mmap2(0x6af000, 4096, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 3, 0x3) = 0x6af000
close(3)                                = 0
open("/lib/libplds4.so", O_RDONLY)      = 3
read(3, "\177ELF\1\1\1\0\0\0\0\0\0\0\0\0\3\0\3\0\1\0\0\0\220\312\3\0024\0\0\0"..., 512) = 512
fstat64(3, {st_mode=S_IFREG|0755, st_size=11588, ...}) = 0
mmap2(NULL, 8660, PROT_READ|PROT_EXEC, MAP_PRIVATE|MAP_DENYWRITE, 3, 0) = 0x6b0000
mmap2(0x6b2000, 4096, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 3, 0x2) = 0x6b2000
close(3)                                = 0
open("/lib/libnspr4.so", O_RDONLY)      = 3
read(3, "\177ELF\1\1\1\0\0\0\0\0\0\0\0\0\3\0\3\0\1\0\0\0\240\207\0\0024\0\0\0"..., 512) = 512
fstat64(3, {st_mode=S_IFREG|0755, st_size=232252, ...}) = 0
mmap2(NULL, 237024, PROT_READ|PROT_EXEC, MAP_PRIVATE|MAP_DENYWRITE, 3, 0) = 0x6b3000
mmap2(0x6ea000, 4096, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 3, 0x37) = 0x6ea000
mmap2(0x6eb000, 7648, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_ANONYMOUS, -1, 0) = 0x6eb000
close(3)                                = 0
open("/lib/libpthread.so.0", O_RDONLY)  = 3
read(3, "\177ELF\1\1\1\0\0\0\0\0\0\0\0\0\3\0\3\0\1\0\0\0\20\270\247\0004\0\0\0"..., 512) = 512
fstat64(3, {st_mode=S_IFREG|0755, st_size=131332, ...}) = 0
mmap2(NULL, 98784, PROT_READ|PROT_EXEC, MAP_PRIVATE|MAP_DENYWRITE, 3, 0) = 0x6ed000
mmap2(0x702000, 8192, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 3, 0x14) = 0x702000
mmap2(0x704000, 4576, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_ANONYMOUS, -1, 0) = 0x704000
close(3)                                = 0
mmap2(NULL, 4096, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) = 0xb7ef5000
open("/usr/lib/libkrb5support.so.0", O_RDONLY) = 3
read(3, "\177ELF\1\1\1\0\0\0\0\0\0\0\0\0\3\0\3\0\1\0\0\0\20\372\211\0004\0\0\0"..., 512) = 512
fstat64(3, {st_mode=S_IFREG|0755, st_size=33844, ...}) = 0
mmap2(NULL, 34916, PROT_READ|PROT_EXEC, MAP_PRIVATE|MAP_DENYWRITE, 3, 0) = 0x706000
mmap2(0x70e000, 4096, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 3, 0x7) = 0x70e000
close(3)                                = 0
open("/lib/libkeyutils.so.1", O_RDONLY) = 3
read(3, "\177ELF\1\1\1\0\0\0\0\0\0\0\0\0\3\0\3\0\1\0\0\0`\230\212\0004\0\0\0"..., 512) = 512
fstat64(3, {st_mode=S_IFREG|0755, st_size=8008, ...}) = 0
mmap2(NULL, 9292, PROT_READ|PROT_EXEC, MAP_PRIVATE|MAP_DENYWRITE, 3, 0) = 0x70f000
mmap2(0x711000, 4096, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 3, 0x1) = 0x711000
close(3)                                = 0
open("/lib/libselinux.so.1", O_RDONLY)  = 3
read(3, "\177ELF\1\1\1\0\0\0\0\0\0\0\0\0\3\0\3\0\1\0\0\0\260\273\252\0004\0\0\0"..., 512) = 512
fstat64(3, {st_mode=S_IFREG|0755, st_size=110076, ...}) = 0
mmap2(NULL, 113564, PROT_READ|PROT_EXEC, MAP_PRIVATE|MAP_DENYWRITE, 3, 0) = 0x712000
mmap2(0x72c000, 8192, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 3, 0x19) = 0x72c000
close(3)                                = 0
mmap2(NULL, 4096, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) = 0xb7ef4000
mmap2(NULL, 4096, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) = 0xb7ef3000
set_thread_area({entry_number:-1 -> 6, base_addr:0xb7ef3730, limit:1048575, seg_32bit:1, contents:0, read_exec_only:0, limit_in_pages:1, seg_not_present:0, useable:1}) = 0
mprotect(0x72c000, 4096, PROT_READ)     = 0
mprotect(0x702000, 4096, PROT_READ)     = 0
mprotect(0x690000, 4096, PROT_READ)     = 0
mprotect(0x687000, 8192, PROT_READ)     = 0
mprotect(0x2cd000, 4096, PROT_READ)     = 0
mprotect(0x2c0000, 4096, PROT_READ)     = 0
mprotect(0x294000, 4096, PROT_READ)     = 0
mprotect(0x140000, 4096, PROT_READ)     = 0
mprotect(0x12c000, 4096, PROT_READ)     = 0
munmap(0xb7ef8000, 98896)               = 0
set_tid_address(0xb7ef3778)             = 16751
set_robust_list(0xb7ef3780, 0xc)        = 0
futex(0xbfa1f000, FUTEX_WAKE_PRIVATE, 1) = 0
rt_sigaction(SIGRTMIN, {0x6f12c0, [], SA_SIGINFO}, NULL, 8) = 0
rt_sigaction(SIGRT_1, {0x6f1700, [], SA_RESTART|SA_SIGINFO}, NULL, 8) = 0
rt_sigprocmask(SIG_UNBLOCK, [RTMIN RT_1], NULL, 8) = 0
getrlimit(RLIMIT_STACK, {rlim_cur=10240*1024, rlim_max=RLIM_INFINITY}) = 0
uname({sys="Linux", node="arlin5", ...}) = 0
brk(0)                                  = 0xb834a000
brk(0xb836b000)                         = 0xb836b000
open("/etc/selinux/config", O_RDONLY|O_LARGEFILE) = 3
fstat64(3, {st_mode=S_IFREG|0644, st_size=439, ...}) = 0
mmap2(NULL, 4096, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) = 0xb7f10000
read(3, "\n# This file controls the state "..., 4096) = 439
read(3, "", 4096)                       = 0
close(3)                                = 0
munmap(0xb7f10000, 4096)                = 0
statfs64("/selinux", 84, {f_type=0xf97cff8c, f_bsize=4096, f_blocks=0, f_bfree=0, f_bavail=0, f_files=0, f_ffree=0, f_fsid={0, 0}, f_namelen=255, f_frsize=4096}) = 0
stat64("/selinux/class", {st_mode=S_IFDIR|0555, st_size=0, ...}) = 0
open("/selinux/mls", O_RDONLY|O_LARGEFILE) = 3
read(3, "1", 19)                        = 1
close(3)                                = 0
open("/dev/null", O_RDWR|O_LARGEFILE)   = 3
close(3)                                = 0
getuid32()                              = 147
socket(PF_FILE, SOCK_STREAM, 0)         = 3
fcntl64(3, F_SETFL, O_RDWR|O_NONBLOCK)  = 0
connect(3, {sa_family=AF_FILE, path="/var/run/nscd/socket"}, 110) = -1 ENOENT (No such file or directory)
close(3)                                = 0
socket(PF_FILE, SOCK_STREAM, 0)         = 3
fcntl64(3, F_SETFL, O_RDWR|O_NONBLOCK)  = 0
connect(3, {sa_family=AF_FILE, path="/var/run/nscd/socket"}, 110) = -1 ENOENT (No such file or directory)
close(3)                                = 0
open("/etc/nsswitch.conf", O_RDONLY)    = 3
fstat64(3, {st_mode=S_IFREG|0644, st_size=1696, ...}) = 0
mmap2(NULL, 4096, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) = 0xb7f10000
read(3, "#\n# /etc/nsswitch.conf\n#\n# An ex"..., 4096) = 1696
read(3, "", 4096)                       = 0
close(3)                                = 0
munmap(0xb7f10000, 4096)                = 0
open("/etc/ld.so.cache", O_RDONLY)      = 3
fstat64(3, {st_mode=S_IFREG|0644, st_size=98896, ...}) = 0
mmap2(NULL, 98896, PROT_READ, MAP_PRIVATE, 3, 0) = 0xb7ef8000
close(3)                                = 0
open("/lib/libnss_files.so.2", O_RDONLY) = 3
read(3, "\177ELF\1\1\1\0\0\0\0\0\0\0\0\0\3\0\3\0\1\0\0\0\340\30\0\0004\0\0\0"..., 512) = 512
fstat64(3, {st_mode=S_IFREG|0755, st_size=54828, ...}) = 0
mmap2(NULL, 45712, PROT_READ|PROT_EXEC, MAP_PRIVATE|MAP_DENYWRITE, 3, 0) = 0x72e000
mmap2(0x738000, 8192, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 3, 0xa) = 0x738000
close(3)                                = 0
mprotect(0x738000, 4096, PROT_READ)     = 0
munmap(0xb7ef8000, 98896)               = 0
open("/etc/passwd", O_RDONLY|0x80000 /* O_??? */) = 3
fcntl64(3, F_GETFD)                     = 0x1 (flags FD_CLOEXEC)
fstat64(3, {st_mode=S_IFREG|0644, st_size=2496, ...}) = 0
mmap2(NULL, 4096, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) = 0xb7f10000
read(3, "root:x:0:0:root:/root:/bin/bash\n"..., 4096) = 2496
close(3)                                = 0
munmap(0xb7f10000, 4096)                = 0
ioctl(1, SNDCTL_TMR_TIMEBASE or TCGETS, 0xbfa1eeb8) = -1 ENOTTY (Inappropriate ioctl for device)
rt_sigaction(SIGPIPE, NULL, {SIG_DFL}, 8) = 0
rt_sigaction(SIGPIPE, {0xb7f13aa0, [], 0}, NULL, 8) = 0
pipe([3, 4])                            = 0
pipe([5, 6])                            = 0
pipe([7, 8])                            = 0
close(3)                                = 0
close(4)                                = 0
clone(child_stack=0, flags=CLONE_CHILD_CLEARTID|CLONE_CHILD_SETTID|SIGCHLD, child_tidptr=0xb7ef3778) = 16752
close(5)                                = 0
close(8)                                = 0
rt_sigaction(SIGTERM, NULL, {SIG_DFL}, 8) = 0
rt_sigaction(SIGTERM, {0xb7f13c00, [], 0}, NULL, 8) = 0
rt_sigaction(SIGINT, NULL, {SIG_DFL}, 8) = 0
rt_sigaction(SIGINT, {0xb7f13c00, [], 0}, NULL, 8) = 0
rt_sigaction(SIGHUP, NULL, {SIG_DFL}, 8) = 0
rt_sigaction(SIGHUP, {0xb7f13c00, [], 0}, NULL, 8) = 0
umask(0)                                = 022
umask(022)                              = 0
write(6, "\0", 1)                       = 1
stat64("/work/test/91/", {st_mode=S_IFDIR|0700, st_size=4096, ...}) = 0
read(7, "D", 1)                         = 1
read(7, "0", 1)                         = 1
read(7, "7", 1)                         = 1
read(7, "5", 1)                         = 1
read(7, "5", 1)                         = 1
read(7, " ", 1)                         = 1
read(7, "0", 1)                         = 1
read(7, " ", 1)                         = 1
read(7, "m", 1)                         = 1
read(7, "e", 1)                         = 1
read(7, "m", 1)                         = 1
read(7, "o", 1)                         = 1
read(7, "r", 1)                         = 1
read(7, "y", 1)                         = 1
read(7, "_", 1)                         = 1
read(7, "t", 1)                         = 1
read(7, "e", 1)                         = 1
read(7, "s", 1)                         = 1
read(7, "t", 1)                         = 1
read(7, "\n", 1)                        = 1
stat64("/work/test/91//memory_test", 0xbfa1e640) = -1 ENOENT (No such file or directory)
mkdir("/work/test/91//memory_test", 0755) = 0
umask(0)                                = 022
umask(022)                              = 0
write(6, "\0", 1)                       = 1
stat64("/work/test/91//memory_test", {st_mode=S_IFDIR|0755, st_size=4096, ...}) = 0
read(7, "C", 1)                         = 1
read(7, "0", 1)                         = 1
read(7, "7", 1)                         = 1
read(7, "5", 1)                         = 1
read(7, "5", 1)                         = 1
read(7, " ", 1)                         = 1
read(7, "5", 1)                         = 1
read(7, "4", 1)                         = 1
read(7, "3", 1)                         = 1
read(7, "2", 1)                         = 1
read(7, " ", 1)                         = 1
read(7, "m", 1)                         = 1
read(7, "e", 1)                         = 1
read(7, "m", 1)                         = 1
read(7, "o", 1)                         = 1
read(7, "r", 1)                         = 1
read(7, "y", 1)                         = 1
read(7, "\n", 1)                        = 1
stat64("/work/test/91//memory_test/memory", 0xbfa1dd10) = -1 ENOENT (No such file or directory)
open("/work/test/91//memory_test/memory", O_WRONLY|O_CREAT|O_LARGEFILE, 0755) = 3
write(6, "\0", 1)                       = 1
fstat64(3, {st_mode=S_IFREG|0755, st_size=0, ...}) = 0
fcntl64(7, F_GETFL)                     = 0 (flags O_RDONLY)
fcntl64(7, F_SETFL, O_RDONLY|O_NONBLOCK) = 0
read(7, "\177ELF\1\1\1\0\0\0\0\0\0\0\0\0\2\0\3\0\1\0\0\0\240\203\4\0104\0\0\0"..., 5432) = 5432
fcntl64(7, F_GETFL)                     = 0x800 (flags O_RDONLY|O_NONBLOCK)
fcntl64(7, F_SETFL, O_RDONLY)           = 0
write(3, "\177ELF\1\1\1\0\0\0\0\0\0\0\0\0\2\0\3\0\1\0\0\0\240\203\4\0104\0\0\0"..., 5432) = 5432
ftruncate64(3, 5432)                    = 0
close(3)                                = 0
read(7, "\0", 1)                        = 1
write(6, "\0", 1)                       = 1
read(7, "C", 1)                         = 1
read(7, "0", 1)                         = 1
read(7, "6", 1)                         = 1
read(7, "4", 1)                         = 1
read(7, "4", 1)                         = 1
read(7, " ", 1)                         = 1
read(7, "8", 1)                         = 1
read(7, "6", 1)                         = 1
read(7, " ", 1)                         = 1
read(7, "f", 1)                         = 1
read(7, "i", 1)                         = 1
read(7, "l", 1)                         = 1
read(7, "e", 1)                         = 1
read(7, "_", 1)                         = 1
read(7, "p", 1)                         = 1
read(7, "b", 1)                         = 1
read(7, "s", 1)                         = 1
read(7, ".", 1)                         = 1
read(7, "1", 1)                         = 1
read(7, "8", 1)                         = 1
read(7, "4", 1)                         = 1
read(7, "6", 1)                         = 1
read(7, ".", 1)                         = 1
read(7, "e", 1)                         = 1
read(7, "a", 1)                         = 1
read(7, "l", 1)                         = 1
read(7, "i", 1)                         = 1
read(7, "n", 1)                         = 1
read(7, "5", 1)                         = 1
stat64("/work/test/91//memory_test/file_pbs.1846.ealin5", 0xbfa1dd10) = -1 ENOENT (No such file or directory)
open("/work/test/91//memory_test/file_pbs.1846.ealin5", O_WRONLY|O_CREAT|O_LARGEFILE, 0644) = 3
write(6, "\0", 1)                       = 1
fstat64(3, {st_mode=S_IFREG|0644, st_size=0, ...}) = 0
fcntl64(7, F_GETFL)                     = 0 (flags O_RDONLY)
fcntl64(7, F_SETFL, O_RDONLY|O_NONBLOCK) = 0
read(7, 0xb834b4b0, 86)                 = -1 EAGAIN (Resource temporarily unavailable)
poll([{fd=7, events=POLLIN, revents=POLLIN}], 1, -1) = 1
read(7, "1846.ealin5\naglin7\nagl"..., 86) = 86
fcntl64(7, F_GETFL)                     = 0x800 (flags O_RDONLY|O_NONBLOCK)
fcntl64(7, F_SETFL, O_RDONLY)           = 0
write(3, "1846.ealin5\naglin7\nagl"..., 86) = 86
ftruncate64(3, 86)                      = 0
close(3)                                = 0
read(7, "\0", 1)                        = 1
write(6, "\0", 1)                       = 1
read(7, "C", 1)                         = 1
read(7, "0", 1)                         = 1
read(7, "6", 1)                         = 1
read(7, "4", 1)                         = 1
read(7, "4", 1)                         = 1
read(7, " ", 1)                         = 1
read(7, "0", 1)                         = 1
read(7, " ", 1)                         = 1
read(7, ".", 1)                         = 1
read(7, "l", 1)                         = 1
read(7, "i", 1)                         = 1
read(7, "s", 1)                         = 1
read(7, "t", 1)                         = 1
read(7, "_", 1)                         = 1
read(7, "l", 1)                         = 1
read(7, "i", 1)                         = 1
read(7, "n", 1)                         = 1
read(7, "k", 1)                         = 1
read(7, "s", 1)                         = 1
read(7, "\n", 1)                        = 1
stat64("/work/test/91//memory_test/.list_links", 0xbfa1dd10) = -1 ENOENT (No such file or directory)
open("/work/test/91//memory_test/.list_links", O_WRONLY|O_CREAT|O_LARGEFILE, 0644) = 3
write(6, "\0", 1)                       = 1
fstat64(3, {st_mode=S_IFREG|0644, st_size=0, ...}) = 0
fcntl64(7, F_GETFL)                     = 0 (flags O_RDONLY)
fcntl64(7, F_SETFL, O_RDONLY|O_NONBLOCK) = 0
fcntl64(7, F_GETFL)                     = 0x800 (flags O_RDONLY|O_NONBLOCK)
fcntl64(7, F_SETFL, O_RDONLY)           = 0
ftruncate64(3, 0)                       = 0
close(3)                                = 0
read(7, "\0", 1)                        = 1
write(6, "\0", 1)                       = 1
read(7, "C", 1)                         = 1
read(7, "0", 1)                         = 1
read(7, "6", 1)                         = 1
read(7, "4", 1)                         = 1
read(7, "4", 1)                         = 1
read(7, " ", 1)                         = 1
read(7, "3", 1)                         = 1
read(7, "4", 1)                         = 1
read(7, "3", 1)                         = 1
read(7, " ", 1)                         = 1
read(7, "m", 1)                         = 1
read(7, "e", 1)                         = 1
read(7, "m", 1)                         = 1
read(7, "o", 1)                         = 1
read(7, "r", 1)                         = 1
read(7, "y", 1)                         = 1
read(7, ".", 1)                         = 1
read(7, "c", 1)                         = 1
read(7, "\n", 1)                        = 1
stat64("/work/test/91//memory_test/memory.c", 0xbfa1dd10) = -1 ENOENT (No such file or directory)
open("/work/test/91//memory_test/memory.c", O_WRONLY|O_CREAT|O_LARGEFILE, 0644) = 3
write(6, "\0", 1)                       = 1
fstat64(3, {st_mode=S_IFREG|0644, st_size=0, ...}) = 0
fcntl64(7, F_GETFL)                     = 0 (flags O_RDONLY)
fcntl64(7, F_SETFL, O_RDONLY|O_NONBLOCK) = 0
read(7, 0xb834b4b0, 343)                = -1 EAGAIN (Resource temporarily unavailable)
poll([{fd=7, events=POLLIN, revents=POLLIN}], 1, -1) = 1
read(7, "#include <stdlib.h>\n#include <st"..., 343) = 343
fcntl64(7, F_GETFL)                     = 0x800 (flags O_RDONLY|O_NONBLOCK)
fcntl64(7, F_SETFL, O_RDONLY)           = 0
write(3, "#include <stdlib.h>\n#include <st"..., 343) = 343
ftruncate64(3, 343)                     = 0
close(3)                                = 0
read(7, "\0", 1)                        = 1
write(6, "\0", 1)                       = 1
read(7, "C", 1)                         = 1
read(7, "0", 1)                         = 1
read(7, "7", 1)                         = 1
read(7, "5", 1)                         = 1
read(7, "5", 1)                         = 1
read(7, " ", 1)                         = 1
read(7, "7", 1)                         = 1
read(7, "4", 1)                         = 1
read(7, "1", 1)                         = 1
read(7, "4", 1)                         = 1
read(7, " ", 1)                         = 1
read(7, "m", 1)                         = 1
read(7, "e", 1)                         = 1
read(7, "m", 1)                         = 1
read(7, "o", 1)                         = 1
read(7, "r", 1)                         = 1
read(7, "y", 1)                         = 1
read(7, "_", 1)                         = 1
read(7, "6", 1)                         = 1
read(7, "4", 1)                         = 1
read(7, "\n", 1)                        = 1
stat64("/work/test/91//memory_test/memory_64", 0xbfa1dd10) = -1 ENOENT (No such file or directory)
open("/work/test/91//memory_test/memory_64", O_WRONLY|O_CREAT|O_LARGEFILE, 0755) = 3
write(6, "\0", 1)                       = 1
fstat64(3, {st_mode=S_IFREG|0755, st_size=0, ...}) = 0
fcntl64(7, F_GETFL)                     = 0 (flags O_RDONLY)
fcntl64(7, F_SETFL, O_RDONLY|O_NONBLOCK) = 0
read(7, 0xb834b4b0, 7414)               = -1 EAGAIN (Resource temporarily unavailable)
poll([{fd=7, events=POLLIN, revents=POLLIN}], 1, -1) = 1
read(7, "\177ELF\2\1\1\0\0\0\0\0\0\0\0\0\2\0>\0\1\0\0\0\220\4@\0\0\0\0\0"..., 7414) = 7414
fcntl64(7, F_GETFL)                     = 0x800 (flags O_RDONLY|O_NONBLOCK)
fcntl64(7, F_SETFL, O_RDONLY)           = 0
write(3, "\177ELF\2\1\1\0\0\0\0\0\0\0\0\0\2\0>\0\1\0\0\0\220\4@\0\0\0\0\0"..., 7414) = 7414
ftruncate64(3, 7414)                    = 0
close(3)                                = 0
read(7, "\0", 1)                        = 1
write(6, "\0", 1)                       = 1
read(7, "E", 1)                         = 1
read(7, "\n", 1)                        = 1
write(6, "\0", 1)                       = 1
chmod("/work/test/91//memory_test", 0755) = 0
--- SIGCHLD (Child exited) @ 0 (0) ---
read(7, "", 1)                          = 0
close(7)                                = 0
waitpid(16752, [{WIFEXITED(s) && WEXITSTATUS(s) == 0}], 0) = 16752
exit_group(0)                           = ?
##################################################

Of course if I launch the command from a terminal, it works..
Any help? I've tried with scp -B or not , rsync without z, etc. etc.
What it really annoys me is that with the previous software stack was working..



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Keywords: rsync/scp fails with ENOTTY problem…
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6 Secure the SSH for RSYNC
 
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[+][-]09.22.2008 at 01:20PM PDT, ID: 22543681

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About this solution

Zones: Bourne-Again Shell (bash), Unix Networking, Open Source Programming
Tags: torque(pbs), clusterresources, 2.3.3, Client:fc9, Server centos5.2
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Solution Provided By: noci
Participating Experts: 2
Solution Grade: B
 
 
[+][-]09.23.2008 at 02:35AM PDT, ID: 22547611

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[+][-]09.23.2008 at 12:24PM PDT, ID: 22553007

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[+][-]09.24.2008 at 08:45AM PDT, ID: 22560901

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[+][-]09.25.2008 at 12:55AM PDT, ID: 22567018

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[+][-]09.25.2008 at 03:03AM PDT, ID: 22567554

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[+][-]09.25.2008 at 03:17AM PDT, ID: 22567622

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[+][-]09.25.2008 at 03:27AM PDT, ID: 22567659

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[+][-]09.25.2008 at 04:13AM PDT, ID: 22567862

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[+][-]09.25.2008 at 04:08PM PDT, ID: 22574881

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[+][-]09.25.2008 at 04:37PM PDT, ID: 22575029

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[+][-]09.26.2008 at 07:57AM PDT, ID: 22580156

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[+][-]09.26.2008 at 08:14AM PDT, ID: 22580362

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[+][-]09.26.2008 at 11:42AM PDT, ID: 22582466

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[+][-]09.30.2008 at 11:29PM PDT, ID: 22611991

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[+][-]10.01.2008 at 05:51AM PDT, ID: 22613639

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[+][-]10.01.2008 at 07:41AM PDT, ID: 22614836

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[+][-]10.01.2008 at 07:46AM PDT, ID: 22614906

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[+][-]10.01.2008 at 03:29PM PDT, ID: 22619722

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[+][-]10.23.2008 at 05:18AM PDT, ID: 22785252

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