you have to put the log4j.properties file in WEB-INF/classes folder.
When the server starts,
It loads all the classes in classes folder, and if log4.properties file is present in classes folder. The log4j property gets set for that particular appliaction.
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to bound with a specific application.
put log4j.properties under /webapps/<application>/cla
http://www.onjava.com/pub/a/onjava/2002/08/07/log4j.html?page=1