An OU in AD was deleted out. At the time it wasn't a big deal we were able to recreate the users and rejoin the PC to the domain. One problem we starting having when our folders redirected, AD assigned the user as the owner of the root folder. Problem is all the files and folders inside the redirected folders didn't receive the new settings. The new user accounts match the old ones. Just seems like AD isn't creating the exclusive owner over all files and folders from the redirected Desktop and My documents.
We have two domain controllers running Server 2008R2 and one running 2003R2. AD functional level is 2003